BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008E10LP1|AL425882
(817 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1638 655 0.0
>3x_Contig1638
Length = 14042
Score = 655 bits (327), Expect = 0.0
Identities = 673/798 (84%)
Strand = Plus / Plus
Query: 4 cctttccctttcatcaataaatatatttattctctaattaattttattctcataatatat 63
||||||| |||||||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 6136 cctttccgtttcatcaataaatatatgtattctctaattaattttatgctcataatatat 6195
Query: 64 ccttttcaccacattttcattcccatnntttcaaactctaattaaaaaaaaaaactatat 123
| || ||| | || ||||||| || ||||| |||||| |||||| || || ||| ||
Sbjct: 6196 cggttgcacgagatggtcattccgatggtttcagactctagttaaaagaagaagctagat 6255
Query: 124 nctnataatatttatttcctattttacttatttaatatttttatctattataataatatc 183
|| |||||||| ||||| || ||||| ||| |||||||| | ||||||||||||||||
Sbjct: 6256 gctgataatattgatttcggatgttactgattgaatattttgagctattataataatatc 6315
Query: 184 aacaaacaaaattttaaccttntttcattcttaattttaaaaacacccatcctatatctc 243
|||||| ||||||||||| | || ||||||| |||||||| ||||||| ||||||||
Sbjct: 6316 aacaaagaaaattttaacgtgggttgattcttaggtttaaaaagacccatcgtatatctc 6375
Query: 244 accaaatatccctaccctattccaaaaataaacactaaccacttaatctctaactttttt 303
|||||||||| |||| ||||| || |||| |||||| |||||||||||||||| |
Sbjct: 6376 accaaatatcggtaccgtattcgaaggataaggactaacgacttaatctctaacttgtgg 6435
Query: 304 taactaaatttaatcctttatctacaatttctctataaatcattcaacaaaaattttcct 363
|||||||||||| |||||||||||||||||||||||| | ||||||||||| ||| | |
Sbjct: 6436 taactaaatttagtcctttatctacaatttctctatagagcattcaacaaagattgtggt 6495
Query: 364 ttttatctatcaaatattattccattactattaatctacttataamattctctatatcaa 423
||||||||||||| ||||||||||||||||||||| ||||||||| ||||| ||||| ||
Sbjct: 6496 ttttatctatcaagtattattccattactattaatgtacttataaaattctgtatatgaa 6555
Query: 424 aactatcaaaaaaactctcacttctccacatcactataataaaaccaacaaaccccatac 483
| |||||| |||||| | |||||||||||||| |||| |||| |||||||| ||||
Sbjct: 6556 gagtatcaagaaaactgtgacttctccacatcagtatagtaaagccaacaaaggggatac 6615
Query: 484 cttttcaattctaacaactatttncctaaacctttcaaattncntaaaacamatamataa 543
|||| || || || |||||||| | ||||| |||||||| ||||| | | | ||||
Sbjct: 6616 ctttgcagttgtagcaactattggcgtaaacgtttcaaatggggtaaaagaaagaaataa 6675
Query: 544 acaatatatcgttcatatatatcatttawaaatcaaatcactaaaattcgattaattctt 603
| | |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 6676 agagtatatcgttcatatatatcatttagaaatcaaatcactaaaattcgattagttctt 6735
Query: 604 aacgttrgtaacaacagtcaatttaactttcttaaccaaattaaatrgaacatccataat 663
| |||| ||| || ||||||||| | ||| ||||||||| ||| || || |||||||| |
Sbjct: 6736 agcgttggtagcagcagtcaattgagcttgcttaaccaagttagatggagcatccatagt 6795
Query: 664 tkgcaacataacttcratcaatctgattctmgtgttgtcttkgaacttttcgtcaatagt 723
| ||||||||||||| |||||||||||||| |||||||||| ||||||||||||| | ||
Sbjct: 6796 tggcaacataacttcgatcaatctgattctggtgttgtcttggaacttttcgtcagtggt 6855
Query: 724 caactttttccattcaccaattgtrtaaactctsacaacttcgtaatcctttncaccgaa 783
|||||| |||||||||||| | || ||||||| ||| ||||||| ||||| |||||||
Sbjct: 6856 caacttgttccattcaccagtggtggaaactctgacagcttcgtagtccttggcaccgaa 6915
Query: 784 aattgtcaataattccaa 801
| ||| ||||||||||||
Sbjct: 6916 agttggcaataattccaa 6933
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 13,514
Number of Sequences: 1807
Number of extensions: 13514
Number of successful extensions: 313
Number of sequences better than 1.0e-20: 1
length of query: 817
length of database: 10,358,551
effective HSP length: 16
effective length of query: 801
effective length of database: 10,329,639
effective search space: 8274040839
effective search space used: 8274040839
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.6 bits)